I like knife edging the leading edge of any separator, Suzuki did this a lot back in the 70s on the works motocrossers etc and I firmly believe it cant hinder flow.
For intakes now I have the media blaster I can texture the surface after cleaning it to the desired volume as it gives such a decent finish over what the tool can do. You do wish to polish the exhaust port through.

Cleaned up intake by the spigot on a stock barrel

The view of the intake ports on the cylinder side, chamfering needs to be re done correctly as it was not 'right' from the factory. Honing of the barrel is done last if its within spec. You usually find a lot of issues on the upper and lower sections of the ports where the liner and port casting do not match correctly.

Looking down the ports at the knife edging on the separators, the silly CCI brass tubes are in the way and slightly scuffed, they need to be replaced.

The finished product of a reworked intake port on a stock barrel. This back lighting view looks very decent for smoothness of flow compared to an oem one.